Tools for mapping high-throughput sequencing data

• Tipo: Outra Publicação em Revista Científica Internacional
• Data: 2012

Autores

Nuno A Fonseca (Autor) FCUP; Rung, J (Autor) Outra; Brazma, A (Autor) Outra; Marioni, JC (Autor) Outra

Revista

Título: Bioinformatics

Vol. 28

Páginas: 3169-3177

ISSN: 1367-4803

Editora: Oxford University Press

Indexação

ISI Web of Knowledge - 147 Citações

Outras Informações

ID Authenticus: P-009-RQC

DOI: 10.1093/bioinformatics/bts605

Abstract (EN): Motivation: A ubiquitous and fundamental step in high-throughput sequencing analysis is the alignment (mapping) of the generated reads to a reference sequence. To accomplish this task numerous software tools have been proposed. Determining the mappers that are most suitable for a specific application is not trivial. Results: This survey focuses on classifying mappers through a wide number of characteristics. The goal is to allow practitioners to compare the mappers more easily and find those that are most suitable for their specific problem.

Idioma: Inglês

Tipo (Avaliação Docente): Científica

Nº de páginas: 9