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Assessment of population structure by single nucleotide polymorphisms (SNPs) in goat breeds

Title
Assessment of population structure by single nucleotide polymorphisms (SNPs) in goat breeds
Type
Article in International Scientific Journal
Year
2006
Authors
Pariset, L
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Cappuccio, I
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Marsan, PA
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Dunner, S
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Luikart, G
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England, PR
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Obexer Ruff, G
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Peter, C
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Marletta, D
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Pilla, F
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Valentini, A
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beja-pereira, a
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FCUP
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Journal
Vol. 833
Pages: 117-120
ISSN: 1570-0232
Publisher: Elsevier
Other information
Authenticus ID: P-008-KK9
Abstract (EN): Single nucleotide polymorphisms (SNPs) may be used in biodiversity studies and commercial tasks like traceability, paternity testing and selection for suitable genotypes. Twenty-seven SNPs were characterized and genotyped on 250 individuals belonging to eight Italian goat breeds. Multilocus genotype data were used to infer population structure and assign individuals to populations. To estimate the number of groups (K) to test in population structure analysis we used likelihood values and variance of the bootstrap samples, deriving optimal K from a drop in the likelihood and a rise in the variance plots against K.
Language: English
Type (Professor's evaluation): Scientific
No. of pages: 4
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